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3rd Project Update (Integrating SWI-Prolog for Semantic Reasoning in Bioclipse)

Thu, 2010-04-08 14:17 | by Samuel Lampa

I just had my 3rd, and last project update presentation (before the final presenation on April 28th), presenting results from comparing the performance of the integrated SWI-Prolog against Jena and Pellet, for a spectrum similarity search query. Find the sldes below.

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Eclipse boot process, classloading, incorporation of native code etc.

Wed, 2009-10-14 12:06 | by Samuel Lampa

This was a very good article on classloading and booting etc. in Bioclipse, with indispensable hints for how to best incorporate native code in eclipse plugins.

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Java/Prolog interface (SWI Prolog JPL) up running!

Tue, 2009-10-06 21:49 | by Samuel Lampa

Install notes for SWI Prolog JPL on Ubuntu Jaunty (9.04)

JPL is a bi-directional Java/Prolog interface for SWI-Prolog, which I hope to be able to use for integrating Blipkit into Bioclipse, so I'm happy to have got it up running tonight. Below are some notes from the installation procedure.

NOTE: These are still rather incomplete notes about how to get this to work.

Starting work on creating a Bioclipse manager

Mon, 2009-09-07 13:57 | by Samuel Lampa

Will now start the work of creating a Bioclipse manager for the integration of DR-PROLOG into Bioclipse.

Egon pointed me to a blog post about a feature they've made in order to make it easier for us who are new to Bioclipse development to get started. Nice, det tackar vi för!